{"schemaVersion":"1.0","sourceCommit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca","sourceVisibility":"private","article":{"id":"api-mansoq-core-teleicu-specimenviewset-50e33632","title":"Specimen API reference · mansoq-core-teleicu","summary":"Static source contract for Specimen: 4 declared or inherited operation mappings, schema/field evidence and authorization/refusal references. Deployment and behavioral review remain explicit.","module":"Laboratory & radiology","roles":["IT administrator","Developer","Integration engineer"],"facilities":["All configured facility types"],"kind":"reference","minutes":6,"prerequisites":["Use the API contract from the installed deployment and an authorized synthetic test environment.","Confirm facility/organization scope, action permissions and optional app enablement.","This reference is static source evidence; complete payload, authorization, failure and end-to-end review remains recorded as pending."],"steps":[],"sections":[{"title":"Declared route and availability","body":"This resource is declared in **mansoq-core-teleicu** at `/api/v1/facility/{facility_external_id}/specimen/`. verified core mount in config/urls.py This is an alternative core contract, not proof that the primary core uses the same behavior. A registered path and an indexed handler do not prove deployment availability, user permission or production readiness."},{"title":"Operation map","body":"| Method | Path | Action | Evidence |\n| --- | --- | --- | --- |\n| GET | `/api/v1/facility/{facility_external_id}/specimen/{external_id}/` | retrieve | declared/inherited method |\n| PUT | `/api/v1/facility/{facility_external_id}/specimen/{external_id}/` | update | declared/inherited method |\n| PATCH | `/api/v1/facility/{facility_external_id}/specimen/{external_id}/` | partial_update | declared/inherited method |\n| POST | `/api/v1/facility/{facility_external_id}/specimen/retrieve_by_accession_identifier/` | retrieve_by_accession_identifier | @action declaration |"},{"title":"retrieve · GET","body":"**GET /api/v1/facility/{facility_external_id}/specimen/{external_id}/** — action `retrieve`. static contract extracted; runtime/permission/payload behavior review pending.\n\nPath and deployment-context parameters:\n\n| Location | Parameter | Type | Required |\n| --- | --- | --- | --- |\n| path | facility_external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n| path | external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n\n**response: SpecimenRetrieveSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\n| Field | Type | Required | Constraints |\n| --- | --- | --- | --- |\n| meta | dict | false | No extra constraint extracted |\n| id | UUID4 \\| None | false | No extra constraint extracted |\n| accession_identifier | str | false | No extra constraint extracted |\n| status | SpecimenStatusOptions | true | No extra constraint extracted |\n| specimen_type | ValueSetBoundCoding[SPECIMEN_TYPE_CODE_VALUESET.slug] | true | No extra constraint extracted |\n| received_time | str \\| None | false | No extra constraint extracted |\n| collection | CollectionSpec \\| None | false | No extra constraint extracted |\n| processing | list[ProcessingSpec] | false | No extra constraint extracted |\n| condition | list[ValueSetBoundCoding[SPECIMEN_CONDITION_VALUESET.slug]] | false | No extra constraint extracted |\n| note | str \\| None | false | No extra constraint extracted |\n| specimen_definition | dict \\| None | false | No extra constraint extracted |\n| service_request | dict \\| None | false | No extra constraint extracted |\n\n**Observed authorization checks:** `can_read_specimen`. Helper/queryset evidence is included; this is not proof of complete security review.\n\n**Declared refusal/error evidence:** PermissionDenied: You do not have permission to read this specimen."},{"title":"update · PUT","body":"**PUT /api/v1/facility/{facility_external_id}/specimen/{external_id}/** — action `update`. static contract extracted; runtime/permission/payload behavior review pending.\n\nPath and deployment-context parameters:\n\n| Location | Parameter | Type | Required |\n| --- | --- | --- | --- |\n| path | facility_external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n| path | external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n\n**request: SpecimenUpdateSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\n| Field | Type | Required | Constraints |\n| --- | --- | --- | --- |\n| meta | dict | false | No extra constraint extracted |\n| id | UUID4 \\| None | false | No extra constraint extracted |\n| accession_identifier | str | false | No extra constraint extracted |\n| status | SpecimenStatusOptions \\| None | false | No extra constraint extracted |\n| specimen_type | ValueSetBoundCoding[SPECIMEN_TYPE_CODE_VALUESET.slug] \\| None | false | No extra constraint extracted |\n| received_time | str \\| None | false | No extra constraint extracted |\n| collection | CollectionSpec \\| None | false | No extra constraint extracted |\n| processing | list[ProcessingSpec] | false | No extra constraint extracted |\n| condition | list[ValueSetBoundCoding[SPECIMEN_CONDITION_VALUESET.slug]] | false | No extra constraint extracted |\n| note | str \\| None | false | No extra constraint extracted |\n\n**response: SpecimenRetrieveSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\nThe declared field table is shown at its first occurrence in this reference; this operation links the same schema.\n\n**Observed authorization checks:** `can_write_specimen`. Helper/queryset evidence is included; this is not proof of complete security review.\n\n**Declared refusal/error evidence:** PermissionDenied: You do not have permission to write this specimen."},{"title":"partial_update · PATCH","body":"**PATCH /api/v1/facility/{facility_external_id}/specimen/{external_id}/** — action `partial_update`. static contract extracted; runtime/permission/payload behavior review pending.\n\nPath and deployment-context parameters:\n\n| Location | Parameter | Type | Required |\n| --- | --- | --- | --- |\n| path | facility_external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n| path | external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n\n**request: SpecimenUpdateSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\nThe declared field table is shown at its first occurrence in this reference; this operation links the same schema.\n\n**response: SpecimenRetrieveSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\nThe declared field table is shown at its first occurrence in this reference; this operation links the same schema.\n\n**Observed authorization checks:** `can_write_specimen`. Helper/queryset evidence is included; this is not proof of complete security review.\n\n**Declared refusal/error evidence:** PermissionDenied: You do not have permission to write this specimen."},{"title":"retrieve_by_accession_identifier · POST","body":"**POST /api/v1/facility/{facility_external_id}/specimen/retrieve_by_accession_identifier/** — action `retrieve_by_accession_identifier`. static contract extracted; runtime/permission/payload behavior review pending.\n\nPath and deployment-context parameters:\n\n| Location | Parameter | Type | Required |\n| --- | --- | --- | --- |\n| path | facility_external_id | router lookup string; semantic ID validation requires handler/schema review | true |\n\n**decorator request: SpecimenRetrieveByAccessionIdentifierSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\n| Field | Type | Required | Constraints |\n| --- | --- | --- | --- |\n| accession_identifier | str | true | No extra constraint extracted |\n\n**decorator responses: SpecimenRetrieveSpec**. Declared fields below; inherited fields are retained in the schema inventory.\n\nThe declared field table is shown at its first occurrence in this reference; this operation links the same schema.\n\n**Observed authorization checks:** `can_read_specimen`. Helper/queryset evidence is included; this is not proof of complete security review.\n\n**Declared refusal/error evidence:** PermissionDenied: You do not have permission to read this specimen; ValidationError: Multiple specimens found with the same accession identifier; ValidationError: Specimen not found with the given accession identifier."},{"title":"Integration review checklist","body":"Confirm the installed route and full schema; review authentication, organization/facility scoping, all accepted fields, value-state and date/time semantics, idempotency, pagination, response/exception branches and the allowed correction/reversal workflow. Test positive and negative cases with synthetic data. This source reference does not establish external certification or replace an illustrated user procedure."}],"troubleshooting":[{"problem":"A declared route is unavailable or a request is rejected","solution":"Compare the installed revision, actual API schema, optional plugin mount, HTTP-method restrictions and recorded validation/permission evidence. Do not bypass a refusal or send a production transaction to test documentation."}],"sources":[{"path":"repositories/teleicu/mansoq-core-teleicu/config/api_router.py","line":311,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":36,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":80,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":319,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":55,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":322,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":74,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":327,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/resources/specimen/spec.py","line":151,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":211,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":46,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":225,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":198,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":332,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":343,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":177,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":219,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":349,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":346,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/resources/specimen/spec.py","line":122,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/base.py","line":215,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":69,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":25,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"}],"related":["it-api-contract","it-api-auth","security-rcm-roles"],"verification":"Static API contract — behavior review pending","version":"f6e9f05f76d4","apiReferenceIds":["backend-resource-c2a63e3550e33632","backend-resource-c2a63e3550e33632:GET:retrieve","backend-resource-c2a63e3550e33632:PUT:update","backend-resource-c2a63e3550e33632:PATCH:partial_update","backend-resource-c2a63e3550e33632:POST:retrieve_by_accession_identifier"]},"backend":{"resources":[{"id":"backend-resource-c2a63e3550e33632","localPrefix":"specimen","viewset":"SpecimenViewSet","classId":"repositories/teleicu/mansoq-core-teleicu:mansoq.emr.api.viewsets.specimen.SpecimenViewSet","basename":"specimen","source":{"path":"repositories/teleicu/mansoq-core-teleicu/config/api_router.py","line":311,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},"conditions":[],"repository":"repositories/teleicu/mansoq-core-teleicu","classSource":{"path":"repositories/teleicu/mansoq-core-teleicu/mansoq/emr/api/viewsets/specimen.py","line":36,"commit":"f6e9f05f76d443b26ebd2369f67d3c3bd52257ca"},"description":"","path":"/api/v1/facility/{facility_external_id}/specimen/","mountStatus":"verified core mount in config/urls.py","operationIds":["backend-resource-c2a63e3550e33632:GET:retrieve","backend-resource-c2a63e3550e33632:PUT:update","backend-resource-c2a63e3550e33632:PATCH:partial_update","backend-resource-c2a63e3550e33632:POST:retrieve_by_accession_identifier"],"unresolvedViewset":false,"reviewStatus":"registered resource enumerated; 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